Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1011128 | Not Available | - | 1391328 - 1392482 | 44399.3 |
| hypothetical protein | SAMN04488505_1011129 | Not Available | - | 1393056 - 1393187 | 4622.57 |
| hypothetical protein | SAMN04488505_1011130 | Not Available | - | 1393316 - 1393606 | 11288.8 |
| helix-turn-helix domain-containing protein | SAMN04488505_1011131 | Not Available | + | 1394041 - 1394667 | 24437.9 |
| hypothetical protein | SAMN04488505_1011132 | Not Available | + | 1394884 - 1395417 | 20565.3 |
| 5'(3')-deoxyribonucleotidase | SAMN04488505_1011133 | Not Available | - | 1395424 - 1395942 | 19622.6 |
| transcriptional regulator, deor family | SAMN04488505_1011134 | Not Available | + | 1396047 - 1396793 | 27520.6 |
| fucose permease | SAMN04488505_1011135 | Not Available | + | 1396837 - 1398084 | 43945.5 |
| carbamoyl-phosphate synthase large subunit | SAMN04488505_1011136 | Not Available | + | 1398339 - 1401155 | 105043.0 |
| competence protein comec | SAMN04488505_1011137 | Not Available | + | 1402412 - 1404370 | 73433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.