Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04488505_1011118 | Not Available | - | 1378945 - 1380150 | 43700.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011119 | Not Available | + | 1380504 - 1380989 | 19301.3 |
| hypothetical protein | SAMN04488505_1011120 | Not Available | + | 1380992 - 1382302 | 47467.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_1011121 | Not Available | + | 1382334 - 1383278 | 35574.3 |
| hypothetical protein | SAMN04488505_1011122 | Not Available | + | 1383431 - 1383646 | 8205.89 |
| predicted zn-dependent peptidase | SAMN04488505_1011123 | Not Available | + | 1383851 - 1386796 | 110820.0 |
| l,d-transpeptidase catalytic domain | SAMN04488505_1011124 | Not Available | + | 1386965 - 1387525 | 21275.7 |
| hypothetical protein | SAMN04488505_1011125 | Not Available | - | 1387531 - 1388472 | 35720.2 |
| acetyl-coenzyme a synthetase | SAMN04488505_1011126 | Not Available | - | 1388673 - 1390592 | 71429.7 |
| hypothetical protein | SAMN04488505_1011127 | Not Available | - | 1390740 - 1391228 | 18205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.