Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | SAMN04488505_1011088 | Not Available | + | 1346168 - 1346815 | 24770.3 |
| ssu ribosomal protein s31p | SAMN04488505_1011089 | Not Available | - | 1347128 - 1347241 | 4016.99 |
| dna-binding protein hu-beta | SAMN04488505_1011090 | Not Available | - | 1347396 - 1347665 | 9461.64 |
| protein of unknown function | SAMN04488505_1011091 | Not Available | - | 1347971 - 1348273 | 12204.5 |
| exodeoxyribonuclease-3 | SAMN04488505_1011092 | Not Available | - | 1348270 - 1349043 | 30018.2 |
| methionine synthase (b12-dependent) | SAMN04488505_1011093 | Not Available | - | 1349137 - 1351875 | 101619.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN04488505_1011094 | Not Available | - | 1351890 - 1352906 | 36941.1 |
| hypothetical protein | SAMN04488505_1011095 | Not Available | + | 1353387 - 1353587 | 7518.91 |
| dna replication and repair protein recr | SAMN04488505_1011096 | Not Available | - | 1353755 - 1354372 | 23035.1 |
| ig-like domain-containing protein | SAMN04488505_1011097 | Not Available | - | 1354439 - 1355917 | 56059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.