Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1011078 | Not Available | + | 1334272 - 1334961 | 24883.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1011079 | Not Available | + | 1335210 - 1338272 | 111642.0 |
| susd family protein | SAMN04488505_1011080 | Not Available | + | 1338318 - 1339697 | 50481.2 |
| hypothetical protein | SAMN04488505_1011081 | Not Available | + | 1339815 - 1340294 | 16978.6 |
| lsu ribosomal protein l13p | SAMN04488505_1011082 | Not Available | + | 1340573 - 1341016 | 16701.4 |
| ssu ribosomal protein s9p | SAMN04488505_1011083 | Not Available | + | 1341031 - 1341420 | 14388.5 |
| ssu ribosomal protein s2p | SAMN04488505_1011084 | Not Available | + | 1341526 - 1342521 | 35013.0 |
| translation elongation factor ts (ef-ts) | SAMN04488505_1011085 | Not Available | + | 1342650 - 1343474 | 29176.0 |
| uridylate kinase | SAMN04488505_1011086 | Not Available | + | 1343594 - 1344307 | 26041.9 |
| protein of unknown function | SAMN04488505_1011087 | Not Available | - | 1344458 - 1345591 | 41555.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.