Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gh3 auxin-responsive promoter | SAMN04488505_1011068 | Not Available | + | 1322495 - 1323979 | 56563.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN04488505_1011069 | Not Available | + | 1324098 - 1324847 | 26617.2 |
| gluconolactonase | SAMN04488505_1011070 | Not Available | - | 1324998 - 1325879 | 32289.6 |
| hypothetical protein | SAMN04488505_1011071 | Not Available | + | 1326006 - 1327058 | 41084.2 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04488505_1011072 | Not Available | - | 1327129 - 1328574 | 54248.4 |
| dna polymerase-3 subunit delta' | SAMN04488505_1011073 | Not Available | - | 1328778 - 1329917 | 43448.8 |
| hypothetical protein | SAMN04488505_1011074 | Not Available | - | 1330041 - 1330577 | 19620.9 |
| glutathione peroxidase | SAMN04488505_1011075 | Not Available | - | 1330730 - 1331266 | 20085.3 |
| comf family protein | SAMN04488505_1011076 | Not Available | - | 1331370 - 1332068 | 26181.9 |
| dna repair protein rada/sms | SAMN04488505_1011077 | Not Available | - | 1332277 - 1333650 | 50506.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.