Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane associated serine protease, rhomboid family | SAMN04488505_1011058 | Not Available | - | 1311808 - 1312755 | 35288.2 |
| rhomboid family protein | SAMN04488505_1011059 | Not Available | - | 1312786 - 1313613 | 31259.3 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04488505_1011060 | Not Available | - | 1313662 - 1315101 | 53842.6 |
| protein of unknown function | SAMN04488505_1011061 | Not Available | + | 1315313 - 1316719 | 53816.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_1011062 | Not Available | + | 1317160 - 1317861 | 25200.8 |
| outer membrane insertion c-terminal signal | SAMN04488505_1011063 | Not Available | + | 1317974 - 1318597 | 21736.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_1011064 | Not Available | + | 1318806 - 1319513 | 26115.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_1011065 | Not Available | + | 1319718 - 1320359 | 22733.2 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04488505_1011066 | Not Available | - | 1320545 - 1321498 | 36108.7 |
| lipopolysaccharide export system atp-binding protein | SAMN04488505_1011067 | Not Available | + | 1321551 - 1322342 | 29751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.