Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN04488505_1011048 | Not Available | + | 1300530 - 1301978 | 55583.1 |
| hypothetical protein | SAMN04488505_1011049 | Not Available | + | 1302028 - 1302720 | 26066.5 |
| recombination protein reca | SAMN04488505_1011050 | Not Available | + | 1302936 - 1303940 | 35910.7 |
| endonuclease/exonuclease/phosphatase family protein | SAMN04488505_1011051 | Not Available | + | 1304514 - 1305329 | 31200.4 |
| hypothetical protein | SAMN04488505_1011052 | Not Available | + | 1305342 - 1305758 | 15881.2 |
| dna-3-methyladenine glycosylase ii | SAMN04488505_1011053 | Not Available | - | 1305759 - 1306598 | 30293.1 |
| peptidase family m28 | SAMN04488505_1011054 | Not Available | - | 1306765 - 1307742 | 35683.1 |
| cysteinyl-trna synthetase | SAMN04488505_1011055 | Not Available | - | 1307804 - 1309300 | 57255.4 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488505_1011056 | Not Available | - | 1309395 - 1310510 | 42683.0 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488505_1011057 | Not Available | - | 1310566 - 1311696 | 43034.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.