Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipocalin-like domain-containing protein | SAMN04488505_101988 | Not Available | + | 1228910 - 1229356 | 16292.0 |
| hydroxypyruvate isomerase | SAMN04488505_101989 | Not Available | - | 1229481 - 1230410 | 34272.1 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488505_101990 | Not Available | + | 1230552 - 1231523 | 35923.4 |
| predicted dehydrogenase | SAMN04488505_101991 | Not Available | + | 1231585 - 1232928 | 50667.3 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488505_101992 | Not Available | + | 1233087 - 1234415 | 50470.2 |
| hypothetical protein | SAMN04488505_101993 | Not Available | - | 1234412 - 1235077 | 23953.0 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04488505_101994 | Not Available | - | 1235345 - 1236793 | 53460.9 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488505_101995 | Not Available | - | 1236921 - 1237616 | 25943.8 |
| choline dehydrogenase | SAMN04488505_101996 | Not Available | - | 1237677 - 1239416 | 63873.0 |
| gluconate kinase, fggy family | SAMN04488505_101997 | Not Available | + | 1239481 - 1240974 | 54176.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.