Aminobacterium colombiense DSM 12261

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Aminobacteriaceae

Genus

Aminobacterium

Description

Aminobacterium colombiense (strain DSM 12261 / ALA-1) is a strictly anaerobic, amino acid-fermenting, Gram-negative bacterium isolated from an anaerobic lagoon of a dairy wastewater treatment plant. This organism can grow on serine, threonine, glycine and pyruvate. Alanine, glutamate, valine, isoleucine, leucine, methionine, aspartate and malate are oxidized only in the presence of the hydrogenotroph, M. formicicum (H2 scavenger). In addition, the utilization of cysteine, threonine and alpha-ketoglutarate are also improved in the presence of M. formicicum. An 80% hydrogen atmosphere inhibits growth on threonine and alpha-ketoglutarate, whereas glycine degradation is not affected. Serine and pyruvate are partially affected by the presence of hydrogen. The fermentation of serine to acetate occurs via the conversion of serine to pyruvate and ammonia with a serine dehydratase. The optimal growth temperature is 37 degrees Celsius and the temperature range for growth is between 20 and 42 degrees Celsius, with no growth occurring at 18 and 45 degrees Celsius. It does not require NaCl for growth but tolerates less than 1.5% NaCl. Optimum growth occurs in the presence of 0.05 to 0.5%NaCl. The pH range for growth is 6.6 to 8.5 with an optimum pH around 7.3. (Adapted from PMID: 16887649). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyAminobacteriaceae
GenusAminobacterium
SpeciesAminobacterium colombiense
StrainDSM 12261

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aminobacterium colombiense DSM 12261
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Aminobacterium colombiense DSM 12261


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

No genes available for this genome.

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites