Acidaminococcus intestini RyC-MR95 str. RYC-MR95

Gram-negativeCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus intestini RyC-MR95 str. RYC-MR95 is a Gram-negative, anaerobic cocci that plays a role in the gut microbiome. This microbe is notable for its ability to thrive in an oxygen-deprived environment, which is characteristic of many members of the gut microbiota. The coccoid morphology of A. intestini suggests a potential for forming clusters, which may facilitate its survival and interaction with other microbial species in the intestinal niche. As an anaerobic bacterium, A. intestini is adapted to the low-oxygen conditions of the intestines, where it may contribute to various metabolic processes, including the fermentation of amino acids and production of short-chain fatty acids. Such metabolic activities can influence gut health and may play a role in regulating host metabolism. Understanding the properties of A. intestini, including its anaerobic nature and cocci shape, provides insights into the complex interactions within the intestinal microbiome. This microbe's adaptation to anaerobic conditions highlights the dynamic nature of microbial communities in the gut, emphasizing the importance of anaerobes in maintaining a balanced and functional microbiota that supports host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus intestini
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus intestini RyC-MR95 str. RYC-MR95

Accession NumberNC_016077.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2186 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1260489 - 1260501Not Available
Tape measure proteinACIN_RS05860Not Available-1272369 - 1276004128568.0
hypothetical proteinACIN_RS05865Not Available-1275997 - 127631111998.4
hypothetical proteinACIN_RS05870Not Available-1276350 - 127678116074.5
Putative phage major tail proteinACIN_RS05875Not Available-1276793 - 127732018657.5
hypothetical proteinACIN_RS05880Not Available-1277333 - 127773414191.0
hypothetical proteinACIN_RS05885Not Available-1277701 - 127809914341.0
Tail assembly chaperoneACIN_RS05890Not Available-1278104 - 127855316548.8
Capsid proteinACIN_RS05895Not Available-1278556 - 127942231157.0
hypothetical proteinACIN_RS05900Not Available-1279429 - 128010924164.5

Displaying genes 1 – 10 of 2410 in total

Pathways

165 pathways

Metabolites

677 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021245-dehydro-4-deoxy-D-glucarateC6H6O7Chemical structure of 5-dehydro-4-deoxy-D-glucarateNot available
Average190.1076Da
Monoisotopic190.0113525Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da
BASm0002644(9Z,12Z)-octadecadienoyl-CoAC39H62N7O17P3SChemical structure of (9Z,12Z)-octadecadienoyl-CoA6709-57-5
Average1025.94Da
Monoisotopic1025.31577Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da

Displaying 11–20 of 677 metabolites