Acidaminococcus intestini RyC-MR95 str. RYC-MR95

Gram-negativeCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus intestini RyC-MR95 str. RYC-MR95 is a Gram-negative, anaerobic cocci that plays a role in the gut microbiome. This microbe is notable for its ability to thrive in an oxygen-deprived environment, which is characteristic of many members of the gut microbiota. The coccoid morphology of A. intestini suggests a potential for forming clusters, which may facilitate its survival and interaction with other microbial species in the intestinal niche. As an anaerobic bacterium, A. intestini is adapted to the low-oxygen conditions of the intestines, where it may contribute to various metabolic processes, including the fermentation of amino acids and production of short-chain fatty acids. Such metabolic activities can influence gut health and may play a role in regulating host metabolism. Understanding the properties of A. intestini, including its anaerobic nature and cocci shape, provides insights into the complex interactions within the intestinal microbiome. This microbe's adaptation to anaerobic conditions highlights the dynamic nature of microbial communities in the gut, emphasizing the importance of anaerobes in maintaining a balanced and functional microbiota that supports host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus intestini
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus intestini RyC-MR95 str. RYC-MR95

Accession NumberNC_016077.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2186 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttrNot AvailableNot Available+1298702 - 1298714Not Available
AttlNot AvailableNot Available+1348703 - 1348715Not Available
Site-specific recombinase for integration and excisionACIN_RS06275Not Available-1348968 - 135064765191.1
shoct domain-containing proteinACIN_RS12645Not Available-1350696 - 13508576415.81
deoxyribose-phosphate aldolaseACIN_RS06280Not Available-1350850 - 135124214775.9
dna-3-methyladenine glycosylase family proteinACIN_RS06285Not Available+1351493 - 135215224926.3
restriction endonuclease, saci familyACIN_RS06290Not Available+1352155 - 135324341086.5
Adomet-mtaseACIN_RS06295Not Available-1353272 - 135433939938.0
Putative transposaseACIN_RS06300Not Available-1354359 - 13545507368.14
hypothetical proteinACIN_RS06305Not Available-1354637 - 135493011405.4

Displaying genes 41 – 50 of 2410 in total

Pathways

165 pathways

Metabolites

677 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da

Displaying 1–10 of 677 metabolites