Streptococcus suis BM407

Gram-positiveCocciNon-motileFacultative

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococci are non-motile, Gram-positive cocci with widely varying pathogenic potential that occur in pairs or chains. Streptococcus suis is a major porcine pathogen in many countries. It causes serious zoonotic diseases (diseases which can be transmitted naturally between animals and humans) such as meningitis, septicaemia, endocarditis, arthritis, and septic shock in both pigs and human beings, and mortality is high. There are 35 serotypes of S.suis, of which serotype SS2 is the most prevalent. Human infection is almost always associated with exposure to pigs or their food products. Infection is rare in Europe and N. America, while infections rates with S. suis are greater in S.E. Asia and China. Meningitis is the most common presentation in humans, but septicemia and endocarditis are also seen. Strain BM407 is ST1 by MLST, and was isolated from cerebrospinal fluid from a human case of meningitis in Ho Chi Minh City, Vietnam in 2004. It is resistant to trimethoprim-sulfamethoxazole, tetracycline, erythromycin, azithromycin and chloramphenicol and susceptible to penicillin, ceftriaxone and vancomycin. It contains an almost identical pathogenicity island to that previously found in human pathogenic strains (STRS2 and STRSY), although it was probably acquired. This island is not however absolutely required for human pathogenicity (adapted from PubMed 19603075). (HAMAP: STRS4)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus suis
StrainBM407

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus suis BM407
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains-Pairs
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Streptococcus suis BM407


Gene Summary

Adenine Count

7582 bp

Thymine Count

8042 bp

Guanine Count

3971 bp

Cytosine Count

4984 bp

Genome Length

24579 bp

Protein-coding Genes

30 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
para family proteinSSUBM407_RS10465Not Available+1 - 89734437.7
peptide-binding proteinSSUBM407_RS10470Not Available+989 - 12047988.81
antitoxinSSUBM407_RS10475Not Available+1221 - 149310721.8
zeta toxin family proteinSSUBM407_RS10480Not Available+1495 - 235832405.9
is6-like element is1216 family transposaseSSUBM407_RS10485Not Available-2663 - 334326983.9
response regulator transcription factorSSUBM407_RS10490Not Available-3397 - 406525653.5
lyttr family dna-binding domain-containing proteinSSUBM407_RS10495Not Available-4069 - 440112973.8
hypothetical proteinSSUBM407_RS10500Not Available+4591 - 495914600.7
recombinase family proteinSSUBM407_RS10505Not Available-4988 - 557822675.4
primase c-terminal domain-containing proteinSSUBM407_RS10510Not Available-5724 - 721457253.6

Displaying genes 1 – 10 of 2135 in total

Metabolites

343 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001861(2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolC12H12O2Chemical structure of (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolNot available
Average188.226Da
Monoisotopic188.0837296Da

Displaying 1–10 of 343 metabolites