Brachyspira hyodysenteriae WA1

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Brachyspirales

Family

Brachyspiraceae

Genus

Brachyspira

Description

Brachyspira hyodysenteriae is an anaerobic spirochete that is the causative agent of swine dysentery, severe inflammation of the large intestine with a bloody mucous diarrhea of pigs. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility. Many of the predicted CDS show a higher match to Escherichia (36%) and Clostridium (15%) than to other spirochete CDS (only 5%), and it is thought that their genes were probably acquired via horizontal gene transfer. About half of these Escherichia and Clostridium-like CDS are involved in metabolism, suggesting they enhance survival in the large intestine. It also has 123 predicted transport CDS, pathways for glycolysis, gluconeogenesis, a non-oxidative pentose phosphate pathway, nucleotide metabolism, lipopolysaccharide biosynthesis and a respiratory electron transport chain. ATP is probably generated by sugar metabolism. It has 314 putative virulence factors, including proteases, hemolysins, ankyrin proteins, potential type III secretion system and CDS involved in chemotaxis (adapted from http://www.thepigsite.com/diseaseinfo/116/swine-dysentery and PubMed 19262690). (HAMAP: BRAHW)

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderBrachyspirales
FamilyBrachyspiraceae
GenusBrachyspira
SpeciesBrachyspira hyodysenteriae
StrainWA1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Pig
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Brachyspira hyodysenteriae WA1

Accession NumberNC_012225.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2576 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribulose-phosphate 3-epimeraseBHWA1_RS00005Not Available+730 - 138323601.7
eama family transporter rardBHWA1_RS00010Not Available+1471 - 234032448.8
hypothetical proteinBHWA1_RS00015Not Available-2431 - 317728687.2
hypothetical proteinBHWA1_RS00020Not Available-3193 - 385226001.0
hypothetical proteinBHWA1_RS00025Not Available+4071 - 437612051.6
tetratricopeptide repeat proteinBHWA1_RS00030Not Available+4387 - 482116926.3
tetratricopeptide repeat proteinBHWA1_RS00035Not Available+4818 - 654566834.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaBHWA1_RS00040Not Available+6535 - 738032522.8
hypothetical proteinBHWA1_RS00045Not Available-7377 - 794021198.6
pyruvate kinaseBHWA1_RS00050Not Available+8100 - 953352182.0

Displaying genes 1 – 10 of 2615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

45 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003335L-glutamyl 5-phosphateC5H8NO7PChemical structure of L-glutamyl 5-phosphateNot available
Average225.094Da
Monoisotopic225.0049358Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm00033514-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PSChemical structure of 4-methyl-5-(2-phosphooxyethyl)-thiazoleNot available
Average221.17Da
Monoisotopic220.9922631Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da

Displaying 11–20 of 45 metabolites