Brachyspira hyodysenteriae WA1

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Brachyspirales

Family

Brachyspiraceae

Genus

Brachyspira

Description

Brachyspira hyodysenteriae is an anaerobic spirochete that is the causative agent of swine dysentery, severe inflammation of the large intestine with a bloody mucous diarrhea of pigs. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility. Many of the predicted CDS show a higher match to Escherichia (36%) and Clostridium (15%) than to other spirochete CDS (only 5%), and it is thought that their genes were probably acquired via horizontal gene transfer. About half of these Escherichia and Clostridium-like CDS are involved in metabolism, suggesting they enhance survival in the large intestine. It also has 123 predicted transport CDS, pathways for glycolysis, gluconeogenesis, a non-oxidative pentose phosphate pathway, nucleotide metabolism, lipopolysaccharide biosynthesis and a respiratory electron transport chain. ATP is probably generated by sugar metabolism. It has 314 putative virulence factors, including proteases, hemolysins, ankyrin proteins, potential type III secretion system and CDS involved in chemotaxis (adapted from http://www.thepigsite.com/diseaseinfo/116/swine-dysentery and PubMed 19262690). (HAMAP: BRAHW)

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderBrachyspirales
FamilyBrachyspiraceae
GenusBrachyspira
SpeciesBrachyspira hyodysenteriae
StrainWA1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Pig
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Brachyspira hyodysenteriae WA1

Accession NumberNC_012225.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2576 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribulose-phosphate 3-epimeraseBHWA1_RS00005Not Available+730 - 138323601.7
eama family transporter rardBHWA1_RS00010Not Available+1471 - 234032448.8
hypothetical proteinBHWA1_RS00015Not Available-2431 - 317728687.2
hypothetical proteinBHWA1_RS00020Not Available-3193 - 385226001.0
hypothetical proteinBHWA1_RS00025Not Available+4071 - 437612051.6
tetratricopeptide repeat proteinBHWA1_RS00030Not Available+4387 - 482116926.3
tetratricopeptide repeat proteinBHWA1_RS00035Not Available+4818 - 654566834.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaBHWA1_RS00040Not Available+6535 - 738032522.8
hypothetical proteinBHWA1_RS00045Not Available-7377 - 794021198.6
pyruvate kinaseBHWA1_RS00050Not Available+8100 - 953352182.0

Displaying genes 1 – 10 of 2615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

45 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da

Displaying 1–10 of 45 metabolites