Zymomonas mobilis subsp. mobilis ATCC 10988

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Zymomonadaceae

Genus

Zymomonas

Description

Zymomonas mobilis subsp. mobilis ATCC 10988 is a Gram-negative, rod-shaped bacterium that typically arranges itself in pairs. This microbe is classified as facultatively anaerobic, indicating its ability to thrive in both the presence and absence of oxygen. Its unique metabolic capabilities contribute to its notable role in fermentation processes, particularly in the production of ethanol. In laboratory settings, Zymomonas mobilis demonstrates a remarkable ability to ferment sugars, such as glucose and fructose, via a distinct Entner-Doudoroff pathway—an alternative to the more common glycolytic pathway found in many other microorganisms. This pathway not only enables efficient energy production but also results in the byproducts of alcohol and carbon dioxide, making Zymomonas mobilis of interest in biofuel research and production. The physiological traits of Zymomonas mobilis subsp. mobilis ATCC 10988, particularly its facultative anaerobic metabolism and its specific sugar fermentation capabilities, suggest its potential utility in sustainable biotechnological applications, such as renewable energy sources and bioprocessing. Understanding this microbe's metabolic processes could provide insights into enhancing fermentation efficiencies and optimizing conditions for industrial applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyZymomonadaceae
GenusZymomonas
SpeciesZymomonas mobilis
Strainsubsp. mobilis ATCC 10988

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Zymomonas mobilis subsp. mobilis ATCC 10988
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Zymomonas mobilis subsp. mobilis ATCC 10988


Gene Summary

Adenine Count

542810 bp

Thymine Count

544485 bp

Guanine Count

463194 bp

Cytosine Count

471284 bp

Genome Length

2021773 bp

Protein-coding Genes

1750 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaZMOB_RS00010Not Available+274 - 172855198.5
abc-f family atp-binding cassette domain-containing proteinZMOB_RS00015Not Available+1823 - 368868706.0
ompa family proteinZMOB_RS00020Not Available+4104 - 519538243.1
heme-degrading domain-containing proteinZMOB_RS00025Not Available+5378 - 593820452.5
bax inhibitor-1/ycca family proteinZMOB_RS00030Not Available+6169 - 689726116.3
dienelactone hydrolase family proteinZMOB_RS00035Not Available-6988 - 799236500.5
competence/damage-inducible protein aZMOB_RS00040Not Available-8005 - 876627181.8
type i methionyl aminopeptidaseZMOB_RS00045Not Available+8879 - 970929851.1
low specificity l-threonine aldolaseZMOB_RS00050Not Available+9775 - 1078836587.6
dmt family transporterZMOB_RS00055Not Available+10826 - 1178234806.8

Displaying genes 1 – 10 of 1923 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

81 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da

Displaying 1–10 of 81 metabolites