Campylobacter gracilis RM3268

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter gracilis RM3268 is a gram-negative, curved rod-shaped bacterium that thrives in a microaerophilic environment, making it a member of the thermophilic campylobacters that prefer elevated temperatures. This organism is classified as a chemoheterotroph, utilizing organic compounds for energy and as a carbon source. Its natural habitat encompasses various body sites in both avian and mammalian species, commonly found in the intestines of poultry and other vertebrates. The gram-negative characteristic of C. gracilis RM3268 denotes its unique cell wall structure, which is thin compared to gram-positive bacteria and is surrounded by an outer membrane containing lipopolysaccharides. This structure plays a significant role in its pathogenicity and resistance to certain environmental stresses. The curved shape of the bacterium contributes to its motility, which is facilitated by a single polar flagellum, allowing it to traverse viscous environments like the intestinal tract efficiently. Being a microaerophile, C. gracilis RM3268 requires reduced oxygen levels for optimal growth, typically around 5% oxygen concentration, and thrives at temperatures ranging from 37°C to 42°C. This temperature preference aligns with the body temperature of birds, its primary hosts, thereby enhancing its survival and colonization efficiency. Beyond its role as a potential pathogen, C. gracilis RM3268 is also of interest in the field of microbiology due to its unique metabolic pathways and the potential applications in food safety and antibiotic research. Its ability to thrive under specific environmental conditions makes it a subject of study for understanding microbial adaptations and their implications in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter gracilis
StrainRM3268

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter gracilis RM3268
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter gracilis RM3268


Gene Summary

Adenine Count

595571 bp

Thymine Count

608558 bp

Guanine Count

514149 bp

Cytosine Count

537291 bp

Genome Length

2255573 bp

Protein-coding Genes

2825 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinCAMGR0001_2760Not Available-1701 - 228222088.3
rrna,type:5sNot AvailableNot Available+2121 - 223718.01
T4-like phage baseplate hub + tail lysozymeCAMGR0001_2761Not Available-2275 - 271516289.0
Hypothetical proteinCAMGR0001_2762Not Available-2712 - 313115765.9
hypothetical proteinCAMGR0001_2763Not Available-3112 - 343512296.7
Hypothetical proteinCAMGR0001_2764Not Available-3541 - 37748855.96
hypothetical proteinCAMGR0001_2765Not Available-3758 - 409612952.8
hypothetical proteinCAMGR0001_2766Not Available-4093 - 462319923.8
hypothetical proteinCAMGR0001_2767Not Available-4626 - 48809773.95
Putative tail fiber assembly-like proteinCAMGR0001_2768Not Available-4877 - 552724417.2

Displaying genes 1 – 10 of 2890 in total

Metabolites

431 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 431 metabolites