Natrialba magadii ATCC 43099

Gram-negativeRodMotileAerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrialba

Description

Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) is an aerobic, haloalkaliphilic (thriving in high salt concentrations and high pH) extremophile archaeon isolated from Lake Magadi in Kenya. It thrives in alkaline hypersaline conditions (pH 9.5, 3.5 M NaCl) and encodes enzymes that are not only salt tolerant but also often tolerant of high pH, high temperatures, and the presence of solvents. (Adapted from:http://genome.jgi-psf.org/natma/natma.home.html). (HAMAP: NATMM)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natrialba
Species	Natrialba magadii
Strain	ATCC 43099

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobic
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	No

Genome Summary

Natrialba magadii ATCC 43099

Accession NumberNC_013923.1

Gene Summary

Adenine Count

73820 bp

Thymine Count

77172 bp

Guanine Count

113731 bp

Cytosine Count

113625 bp

Genome Length

378348 bp

Protein-coding Genes

327 genes

Non-Coding Genes

7 genes

# of Chromosomes/Plasmids

4

Genes

Name	Locus Tag	UniProt	Strand	Coordinates	Molecular Weight
30s ribosomal protein s2	NMAG_RS02000	Not Available	+	419957 - 420748	28480.6
hypothetical protein	NMAG_RS22605	Not Available	+	420958 - 421086	4695.89
glycosyltransferase family 4 protein	NMAG_RS02005	Not Available	-	421118 - 422188	39310.2
duf354 domain-containing protein	NMAG_RS02010	Not Available	-	422211 - 423416	43750.9
thiamine-phosphate synthase family protein	NMAG_RS02015	Not Available	-	423632 - 424561	32949.8
sensor histidine kinase	NMAG_RS02020	Not Available	-	424708 - 425937	45617.0
phosphonate abc transporter, permease protein phne	NMAG_RS02025	Not Available	-	426003 - 426965	33643.9
phosphonate abc transporter atp-binding protein	NMAG_RS02030	Not Available	-	426958 - 427665	25118.8
phosphate/phosphite/phosphonate abc transporter substrate-binding protein	NMAG_RS02035	Not Available	-	427793 - 428743	34217.2
mevalonate kinase	NMAG_RS02040	Not Available	+	428888 - 429874	34101.4

Displaying genes 761 – 770 of 4257 in total

Pathways

23 pathways

1,6-Anhydro-N-acetylmuramic Acid Recycling pathway thumbnail

1,6-Anhydro-N-acetylmuramic Acid Recycling

1,6-Anhydro-N-acetylmuramic Acid Recycling

Show All 23 Pathways

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0005500	1-octadecanoyl-sn-glycero-3-phosphateC21H41O7P		Not available	Average436.5198Da Monoisotopic436.2589902Da
BASm0012554	N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20	Not available	Not available	Average919.893Da Monoisotopic919.366934423Da
BASm0014032	Acetic acidC2H4O2		`64-19-7`	Average60.052Da Monoisotopic60.021129372Da
BASm0014033	AmmoniaH3N		`7664-41-7`	Average17.0305Da Monoisotopic17.026549101Da
BASm0014041	Oleic acidC18H34O2		`112-80-1`	Average282.4614Da Monoisotopic282.255880332Da
BASm0014058	Myristic acidC14H28O2		`544-63-8`	Average228.3709Da Monoisotopic228.20893014Da
BASm0014182	Vaccenic acidC18H34O2		`NULL`	Average282.468Da Monoisotopic282.255880335Da
BASm0014219	Palmitoleic acidC16H30O2		`NULL`	Average254.4082Da Monoisotopic254.224580204Da
BASm0014222	DiethanolamineC4H11NO2		`NULL`	Average105.1356Da Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites