Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail length tape measure protein precursor | SAMN05421512_102363 | Not Available | - | 979696 - 980274 | 19103.8 |
| phage conserved hypothetical protein | SAMN05421512_102364 | Not Available | - | 980264 - 980479 | 7770.31 |
| phage tail tube protein, gta-gp10 | SAMN05421512_102365 | Not Available | - | 980545 - 980913 | 12666.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | SAMN05421512_102366 | Not Available | - | 980916 - 981329 | 14302.8 |
| protein of unknown function | SAMN05421512_102367 | Not Available | - | 981354 - 981764 | 14400.2 |
| head-tail adaptor | SAMN05421512_102368 | Not Available | - | 981761 - 982093 | 11686.9 |
| Dna packaging/head-tail-connector | SAMN05421512_102369 | Not Available | - | 982090 - 982659 | 19908.1 |
| Putative major capsid protein | SAMN05421512_102370 | Not Available | - | 982733 - 984052 | 47164.6 |
| Putative prohead protease | SAMN05421512_102371 | Not Available | - | 984127 - 984705 | 20432.3 |
| hypothetical protein | SAMN05421512_102372 | Not Available | - | 984702 - 984899 | 6810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
