Helicobacter cinaedi CCUG 18818 = ATCC BAA-847

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 is a gram-negative, spiral-shaped bacterium that thrives optimally at 37°C, classifying it as a mesophile. This microbe is a heterotroph, relying on organic compounds for its carbon and energy sources. Additionally, it is categorized as a microaerophile, requiring lower levels of oxygen than what is present in the atmosphere for optimal growth and metabolism. Helicobacter cinaedi is primarily isolated from human gastrointestinal tracts, although it has been found colonizing various other body sites, including blood and stool samples. This bacterium is notable for its role in human health, being associated with gastrointestinal disorders such as gastritis and peptic ulcers. Its unique spiral shape aids motility, allowing it to navigate the viscous mucus layer of the stomach lining, where it adheres and proliferates. The pathogenic potential of Helicobacter cinaedi is particularly noteworthy, given its ability to evade the immune response and establish chronic infections. Genetic adaptations, including the presence of virulence factors, contribute to its survival in harsh gastric conditions. In some cases, this microbe has been linked to extra-gastrointestinal diseases, including bacteremia and infections in immunocompromised patients, highlighting its capacity to disseminate beyond the gastrointestinal tract. Its close relationship with other members of the Helicobacter genus, particularly Helicobacter pylori, raises questions about its evolutionary adaptations and ecological niche among human microbiota. Continued research into Helicobacter cinaedi may unlock new insights into its role in disease etiology and potential therapeutic avenues for managing infections it causes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cinaedi
StrainCCUG 18818 = ATCC BAA-847

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cinaedi CCUG 18818 = ATCC BAA-847


Gene Summary

Adenine Count

690320 bp

Thymine Count

690866 bp

Guanine Count

430092 bp

Cytosine Count

428852 bp

Genome Length

2240130 bp

Protein-coding Genes

2370 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaHCBAA847_RS00005Not Available+1 - 133250729.2
mfs transporterHCBAA847_RS00010Not Available+1454 - 264143868.5
dead/deah box helicaseHCBAA847_RS00015Not Available-2643 - 460473971.8
type i glyceraldehyde-3-phosphate dehydrogenaseHCBAA847_RS00020Not Available-4605 - 563037432.2
sdr family nad(p)-dependent oxidoreductaseHCBAA847_RS00025Not Available+5710 - 650728974.7
lta synthase family proteinHCBAA847_RS00030Not Available-6509 - 854577383.9
thioredoxin family proteinHCBAA847_RS00035Not Available-8604 - 891812125.6
yeih family proteinHCBAA847_RS00040Not Available-8928 - 991735796.5
hypothetical proteinHCBAA847_RS00045Not Available+10200 - 104007750.52
polysaccharide deacetylase family proteinHCBAA847_RS00050Not Available+10523 - 1127229112.2

Displaying genes 1 – 10 of 2417 in total

Metabolites

466 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 466 metabolites