Gordonia bronchialis DSM 43247

Gram-positiveRodNon-motileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) is a pathogenic, aerobic Gram-positive bacterium isolated from the sputum of woman with cavitary disease of both upper lungs. This organism is known to cause infections in immunocompromised and immunocompentent hosts. It causes bacteremia and endocarditis. (Adaptated from PMID: 15184495). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia bronchialis
StrainDSM 43247

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Gordonia bronchialis DSM 43247
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementFilaments
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Gordonia bronchialis DSM 43247

Accession NumberNC_013441.1

Gene Summary

Adenine Count

857357 bp

Thymine Count

857710 bp

Guanine Count

1750098 bp

Cytosine Count

1743437 bp

Genome Length

5208602 bp

Protein-coding Genes

4861 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sgnh/gdsl hydrolase family proteinGBRO_RS04270Not Available+923195 - 92419634162.2
acyltransferaseGBRO_RS04275Not Available-924109 - 92543749534.4
hypothetical proteinGBRO_RS04280Not Available-925701 - 92604812074.0
hnh endonucleaseGBRO_RS04285Not Available+926367 - 92686418442.2
duf305 domain-containing proteinGBRO_RS04290Not Available-926915 - 92761624649.4
lvivd repeat-containing proteinGBRO_RS04295Not Available-927613 - 92912153666.9
srpbcc family proteinGBRO_RS04300Not Available-929264 - 92976118370.6
mfs transporterGBRO_RS04305Not Available-929790 - 93074933876.3
pas and antar domain-containing proteinGBRO_RS04310Not Available-930865 - 93151524601.9
tigr03086 family metal-binding proteinGBRO_RS04315Not Available-931645 - 93223820750.4

Displaying genes 961 – 970 of 5005 in total

Pathways

1340 pathways
2,3-Dihydroxybenzoate Biosynthesis pathway thumbnail
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides pathway thumbnail
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis pathway thumbnail
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism pathway thumbnail
Taurine Metabolism
Taurine Metabolism
Glycolysis and Pyruvate Dehydrogenase pathway thumbnail
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism pathway thumbnail
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism pathway thumbnail
Ornithine Metabolism
Ornithine Metabolism
Proline Metabolism pathway thumbnail
Proline Metabolism
Proline Metabolism
Show All 1340 Pathways

Metabolites

7 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00024581D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranosideC14H25NO11Chemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranosideNot available
Average383.35Da
Monoisotopic383.142760629Da
BASm00037771D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideC15H29N2O11SChemical structure of 1D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideNot available
Average445.46Da
Monoisotopic445.1486574Da
BASm00037801D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateC14H24NO14PChemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateNot available
Average461.314Da
Monoisotopic461.094538615Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0016750X-14847C12H23NO10Chemical structure of X-14847NULL
Average341.313Da
Monoisotopic341.132195945Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da

Displaying 1–7 of 7 metabolites