Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1559 domain-containing protein | PLIM_RS00155 | Not Available | + | 35789 - 36784 | 35617.2 |
| hypothetical protein | PLIM_RS00160 | Not Available | + | 36879 - 38324 | 53102.3 |
| pvc-type heme-binding cxxch protein | PLIM_RS00165 | Not Available | + | 38564 - 42169 | 129541.0 |
| zinc ribbon domain-containing protein | PLIM_RS00170 | Not Available | + | 42475 - 43188 | 26639.9 |
| duf1559 domain-containing protein | PLIM_RS00175 | Not Available | + | 43882 - 44853 | 35066.5 |
| duf1559 domain-containing protein | PLIM_RS00180 | Not Available | + | 44942 - 45913 | 34489.9 |
| bpl-n domain-containing protein | PLIM_RS00185 | Not Available | + | 45961 - 46794 | 29221.0 |
| n-formylglutamate amidohydrolase | PLIM_RS00190 | Not Available | + | 47051 - 47953 | 32300.5 |
| dna polymerase iii subunit beta | PLIM_RS00195 | P26464 | + | 48141 - 49274 | 40564.1 |
| gfo/idh/moca family protein | PLIM_RS00200 | Not Available | - | 49565 - 50875 | 47805.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.