Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heat repeat domain-containing protein | PLIM_RS21505 | Not Available | + | 5351000 - 5351734 | 27021.2 |
| tspo/mbr family protein | PLIM_RS21510 | Q8KBX2 | + | 5351853 - 5352395 | 20121.5 |
| class i sam-dependent methyltransferase | PLIM_RS21515 | Not Available | + | 5352463 - 5353299 | 31237.1 |
| gspe/pule family protein | PLIM_RS21520 | Not Available | - | 5353651 - 5355324 | 61152.6 |
| secretin n-terminal domain-containing protein | PLIM_RS21525 | Not Available | - | 5355484 - 5358984 | 122979.0 |
| magnesium/cobalt transporter cora | PLIM_RS21530 | Q9WZ31 | - | 5359552 - 5360700 | 43968.7 |
| hypothetical protein | PLIM_RS21535 | Not Available | + | 5360699 - 5360890 | 7014.49 |
| diacylglycerol kinase family protein | PLIM_RS21540 | Not Available | + | 5361087 - 5362082 | 36137.7 |
| 3-deoxy-8-phosphooctulonate synthase | PLIM_RS21545 | Q7UQ25 | + | 5362175 - 5363032 | 30646.2 |
| m48 family metallopeptidase | PLIM_RS21550 | Not Available | + | 5363106 - 5363642 | 20603.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.