Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | PLIM_RS21345 | Not Available | + | 5322377 - 5322748 | 13653.4 |
| hypothetical protein | PLIM_RS24290 | Not Available | - | 5324188 - 5324736 | 20035.2 |
| duf3309 family protein | PLIM_RS23790 | Not Available | - | 5324800 - 5324955 | 5616.5 |
| duf2294 domain-containing protein | PLIM_RS21365 | Not Available | - | 5325060 - 5325473 | 14944.9 |
| hypothetical protein | PLIM_RS24295 | Not Available | - | 5325610 - 5325861 | 9459.56 |
| duf2294 domain-containing protein | PLIM_RS21370 | O34380 | + | 5326454 - 5326855 | 14708.0 |
| glycosyltransferase family 4 protein | PLIM_RS21375 | Not Available | - | 5327168 - 5328346 | 43642.8 |
| argininosuccinate synthase | PLIM_RS21380 | Q7UFW4 | - | 5328539 - 5329753 | 44469.4 |
| duf58 domain-containing protein | PLIM_RS21385 | Not Available | + | 5329999 - 5330886 | 33543.0 |
| hemin uptake protein hemp | PLIM_RS24910 | Not Available | + | 5331018 - 5331227 | 7607.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.