Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS21295 | Not Available | - | 5310091 - 5310648 | 20118.1 |
| pseudouridine synthase | PLIM_RS21300 | O67444 | + | 5311030 - 5312694 | 59920.3 |
| dihydroorotate dehydrogenase electron transfer subunit | PLIM_RS21305 | C5D8Q1 | + | 5312871 - 5313740 | 31424.9 |
| gtpase obge | PLIM_RS21310 | B9MRB8 | + | 5313820 - 5314926 | 39740.2 |
| ribose-phosphate pyrophosphokinase | PLIM_RS21315 | Q7UPM4 | + | 5315068 - 5316015 | 34371.7 |
| hypothetical protein | PLIM_RS21320 | Not Available | + | 5316309 - 5318123 | 65599.0 |
| hypothetical protein | PLIM_RS21325 | Not Available | + | 5318311 - 5318775 | 17164.0 |
| cupin domain-containing protein | PLIM_RS21330 | Not Available | + | 5318768 - 5319232 | 16925.9 |
| hypothetical protein | PLIM_RS21335 | Not Available | + | 5319225 - 5320853 | 59927.9 |
| class i sam-dependent rna methyltransferase | PLIM_RS21340 | P50840 | + | 5321093 - 5322289 | 44795.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.