Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | PLIM_RS21240 | Not Available | + | 5298433 - 5299200 | 28075.4 |
| nuclear transport factor 2 family protein | PLIM_RS21245 | Not Available | + | 5299330 - 5299740 | 15316.5 |
| hypothetical protein | PLIM_RS21250 | Not Available | - | 5299915 - 5300415 | 19034.8 |
| gtpase family protein | PLIM_RS21255 | Not Available | - | 5300718 - 5303240 | 94059.1 |
| translation initiation factor if-1 | PLIM_RS21260 | O83135 | + | 5303531 - 5303749 | 8169.96 |
| ribonuclease hi | PLIM_RS21265 | Q7UF86 | + | 5303982 - 5304512 | 18777.1 |
| gdsl-type esterase/lipase family protein | PLIM_RS21275 | Not Available | + | 5304814 - 5306160 | 50003.1 |
| hypothetical protein | PLIM_RS21280 | Not Available | + | 5306343 - 5306960 | 23226.4 |
| duf1501 domain-containing protein | PLIM_RS21285 | Not Available | - | 5307151 - 5308611 | 53594.5 |
| spfh domain-containing protein | PLIM_RS21290 | Not Available | - | 5309050 - 5309904 | 31013.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.