Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | PLIM_RS21120 | Not Available | + | 5269073 - 5269570 | 17955.3 |
| hypothetical protein | PLIM_RS21125 | Not Available | - | 5269590 - 5270084 | 18602.8 |
| o-antigen ligase family protein | PLIM_RS21130 | Not Available | - | 5270195 - 5272987 | 101807.0 |
| polysaccharide biosynthesis tyrosine autokinase | PLIM_RS21135 | P96716 | - | 5272987 - 5275212 | 81718.4 |
| polysaccharide biosynthesis/export family protein | PLIM_RS21140 | Not Available | - | 5275384 - 5276574 | 41976.5 |
| uvrb/uvrc motif-containing protein | PLIM_RS21145 | Q3Z770 | - | 5276916 - 5278250 | 51173.2 |
| abc transporter permease | PLIM_RS23405 | Not Available | + | 5278500 - 5279825 | 47583.6 |
| had family hydrolase | PLIM_RS21155 | Not Available | + | 5279905 - 5280618 | 26744.8 |
| gfo/idh/moca family protein | PLIM_RS21160 | Q9SZ83 | + | 5280873 - 5281994 | 41709.7 |
| hypothetical protein | PLIM_RS21165 | Not Available | + | 5282332 - 5283699 | 50945.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.