Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthetic protein flir | PLIM_RS20900 | Q89AZ0 | - | 5219733 - 5220737 | 35822.3 |
| flagellar biosynthesis protein fliq | PLIM_RS20905 | P35535 | - | 5220803 - 5221078 | 9915.57 |
| flagellar type iii secretion system pore protein flip | PLIM_RS20910 | Q45980 | - | 5221142 - 5222161 | 36944.0 |
| flagellar biosynthetic protein flio | PLIM_RS23380 | Not Available | - | 5222158 - 5222883 | 25764.2 |
| flagellar motor switch protein flin | PLIM_RS24845 | P24073 | - | 5222903 - 5223484 | 20391.2 |
| duf4269 domain-containing protein | PLIM_RS20925 | Not Available | + | 5223657 - 5224250 | 22144.9 |
| spermidine synthase | PLIM_RS20930 | Not Available | - | 5224242 - 5227889 | 133559.0 |
| substrate-binding domain-containing protein | PLIM_RS20935 | Not Available | - | 5228092 - 5229168 | 38918.4 |
| hypothetical protein | PLIM_RS20940 | Not Available | + | 5229194 - 5229730 | 20002.4 |
| duf1559 domain-containing protein | PLIM_RS20945 | Not Available | + | 5229795 - 5230760 | 34400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.