Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS01320 | Not Available | + | 330322 - 330936 | 23133.5 |
| hpp family protein | PLIM_RS01325 | Not Available | - | 331071 - 331706 | 22820.7 |
| marr family winged helix-turn-helix transcriptional regulator | PLIM_RS01330 | Not Available | + | 332137 - 332634 | 19406.3 |
| cation-transporting p-type atpase | PLIM_RS01335 | P63688 | + | 332698 - 335451 | 99605.6 |
| hypothetical protein | PLIM_RS01340 | Not Available | - | 335474 - 335830 | 13627.3 |
| isoprenyl transferase | PLIM_RS01345 | Q7UF53 | - | 335856 - 336794 | 35718.3 |
| nadh-quinone oxidoreductase subunit nuoh | PLIM_RS01350 | Q2IL15 | + | 337151 - 338410 | 46114.8 |
| nadh-quinone oxidoreductase subunit j | PLIM_RS22235 | Q6YXQ0 | + | 338407 - 339279 | 30628.8 |
| nadh-quinone oxidoreductase subunit nuok | PLIM_RS01360 | B3QP51 | + | 339276 - 339578 | 10645.3 |
| nadh-quinone oxidoreductase subunit l | PLIM_RS01365 | P29924 | + | 339638 - 341968 | 83760.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.