Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | PLIM_RS00460 | Q9ZHC7 | - | 118327 - 120705 | 84733.2 |
| hypothetical protein | PLIM_RS00470 | Not Available | + | 121308 - 121610 | 9626.45 |
| nipsnap family protein | PLIM_RS00475 | Not Available | + | 121809 - 122363 | 20158.7 |
| tolc family protein | PLIM_RS00480 | Not Available | - | 122511 - 124706 | 81593.8 |
| ggdef domain-containing protein | PLIM_RS22135 | Not Available | + | 125292 - 127025 | 63206.6 |
| 2-isopropylmalate synthase | PLIM_RS00490 | Q7UI51 | - | 127138 - 128703 | 57085.8 |
| hypothetical protein | PLIM_RS00495 | Not Available | - | 129287 - 131785 | 90889.9 |
| hypothetical protein | PLIM_RS00500 | Not Available | - | 131848 - 132150 | 10644.8 |
| voc family protein | PLIM_RS00505 | Not Available | - | 132217 - 132702 | 17702.3 |
| aminofutalosine synthase mqne | PLIM_RS00510 | Q5SK48 | - | 132839 - 133999 | 44150.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.