Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | PLIM_RS00350 | Not Available | - | 89058 - 90866 | 65381.6 |
| slc13 family permease | PLIM_RS00355 | Q49YW0 | - | 91167 - 92885 | 61526.2 |
| abc transporter atp-binding protein | PLIM_RS00360 | P94440 | - | 92956 - 93969 | 36844.4 |
| diacylglycerol/polyprenol kinase family protein | PLIM_RS00365 | Not Available | - | 94142 - 94972 | 30618.6 |
| duf1559 domain-containing protein | PLIM_RS00375 | Not Available | + | 95821 - 96777 | 34227.1 |
| carboxypeptidase-like regulatory domain-containing protein | PLIM_RS00380 | Not Available | + | 96906 - 97334 | 14770.7 |
| hypothetical protein | PLIM_RS24315 | Not Available | + | 97383 - 97529 | 5433.46 |
| hypothetical protein | PLIM_RS00385 | Not Available | - | 97673 - 100711 | 111666.0 |
| type iv pilus assembly protein pilm | PLIM_RS00395 | Not Available | + | 101772 - 104021 | 81990.8 |
| hypothetical protein | PLIM_RS22125 | Not Available | + | 104138 - 105877 | 60071.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.