Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnd family transporter | PLIM_RS00255 | Not Available | + | 64239 - 66605 | 86879.4 |
| dna-processing protein dpra | PLIM_RS00260 | P43862 | - | 66641 - 67747 | 39317.7 |
| tpm domain-containing protein | PLIM_RS22110 | Not Available | + | 68055 - 69056 | 34412.6 |
| vwa domain-containing protein | PLIM_RS00270 | Not Available | + | 69523 - 71595 | 76001.8 |
| aminodeoxychorismate/anthranilate synthase component ii | PLIM_RS00275 | P20576 | - | 71816 - 72415 | 21894.6 |
| rna-binding s4 domain-containing protein | PLIM_RS00280 | Not Available | + | 72650 - 72874 | 8005.74 |
| hu family dna-binding protein | PLIM_RS00285 | Not Available | - | 73146 - 73466 | 11464.3 |
| fha domain-containing protein | PLIM_RS22115 | Not Available | + | 73924 - 74706 | 27482.1 |
| rsmd family rna methyltransferase | PLIM_RS22120 | O34331 | + | 74830 - 75477 | 24287.2 |
| fmdb family transcriptional regulator | PLIM_RS00300 | Not Available | - | 75501 - 75788 | 10475.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.