Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS24350 | Not Available | - | 1225835 - 1225978 | 5301.58 |
| duf1559 domain-containing protein | PLIM_RS04965 | Not Available | - | 1226037 - 1228265 | 81517.0 |
| hypothetical protein | PLIM_RS04970 | Not Available | + | 1229196 - 1229678 | 17647.0 |
| tigr01777 family oxidoreductase | PLIM_RS04975 | P73467 | - | 1229877 - 1231355 | 53694.4 |
| lysozyme inhibitor lpri family protein | PLIM_RS04980 | Not Available | - | 1232352 - 1232741 | 14724.7 |
| hypothetical protein | PLIM_RS04985 | Not Available | - | 1232850 - 1233341 | 18680.3 |
| hypothetical protein | PLIM_RS04990 | Not Available | - | 1234045 - 1234545 | 18507.0 |
| hypothetical protein | PLIM_RS04995 | Not Available | - | 1234661 - 1235080 | 15545.8 |
| smi1/knr4 family protein | PLIM_RS05000 | Not Available | - | 1235292 - 1235711 | 15261.0 |
| suppressor of fused domain protein | PLIM_RS05005 | Q9UMX1 | - | 1235810 - 1236463 | 24568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.