Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1559 domain-containing protein | PLIM_RS04915 | Not Available | - | 1212420 - 1213394 | 34354.4 |
| carboxypeptidase regulatory-like domain-containing protein | PLIM_RS04920 | Not Available | - | 1213464 - 1213838 | 13472.8 |
| duf1559 domain-containing protein | PLIM_RS04925 | Not Available | - | 1214020 - 1214976 | 33676.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | PLIM_RS04935 | P06134 | + | 1215400 - 1216038 | 23202.1 |
| hypothetical protein | PLIM_RS04940 | Not Available | - | 1216797 - 1218605 | 66678.2 |
| gh3 auxin-responsive promoter family protein | PLIM_RS04945 | Q6I581 | - | 1218881 - 1220641 | 66110.7 |
| small basic protein | PLIM_RS04950 | Not Available | - | 1220960 - 1221241 | 10683.3 |
| sodium:neurotransmitter symporter | PLIM_RS22450 | Q58715 | + | 1221702 - 1223783 | 76710.3 |
| hypothetical protein | PLIM_RS04960 | Not Available | - | 1224777 - 1225082 | 11341.5 |
| hypothetical protein | PLIM_RS24035 | Not Available | + | 1225553 - 1225762 | 7121.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.