Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | PLIM_RS04810 | P95160 | + | 1181834 - 1183165 | 48076.4 |
| sgcj/ecac family oxidoreductase | PLIM_RS04815 | Not Available | + | 1183512 - 1184465 | 35426.4 |
| m48 family metallopeptidase | PLIM_RS04820 | Not Available | + | 1184513 - 1186492 | 68753.0 |
| polyphosphate kinase 2 family protein | PLIM_RS04825 | Q6N140 | + | 1186613 - 1187512 | 34988.6 |
| histidine phosphatase family protein | PLIM_RS04830 | Not Available | + | 1187877 - 1188515 | 23588.3 |
| glycosyltransferase family 39 protein | PLIM_RS04835 | Not Available | - | 1188749 - 1190638 | 70258.9 |
| duf1592 domain-containing protein | PLIM_RS04840 | Not Available | - | 1190725 - 1193331 | 98613.2 |
| formylglycine-generating enzyme family protein | PLIM_RS04845 | D1A7C3 | + | 1193637 - 1194632 | 36695.4 |
| heavy metal translocating p-type atpase | PLIM_RS04850 | O30085 | + | 1194629 - 1196593 | 69370.5 |
| alcohol dehydrogenase catalytic domain-containing protein | PLIM_RS04855 | Not Available | - | 1196748 - 1197707 | 34413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.