Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS22435 | Not Available | - | 1168658 - 1170064 | 48965.1 |
| hypothetical protein | PLIM_RS04760 | Not Available | - | 1170216 - 1171079 | 31588.5 |
| rna polymerase sigma factor | PLIM_RS22440 | Not Available | - | 1171076 - 1171645 | 21964.5 |
| prolyl oligopeptidase family serine peptidase | PLIM_RS04770 | Q10MJ1 | + | 1172138 - 1174900 | 100868.0 |
| gfo/idh/moca family protein | PLIM_RS04775 | Q6M0B9 | - | 1175355 - 1176434 | 39633.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | PLIM_RS04780 | B5YHC0 | - | 1176431 - 1177279 | 30874.8 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | PLIM_RS04785 | Q2W0G6 | - | 1177485 - 1178420 | 34666.6 |
| omph family outer membrane protein | PLIM_RS04790 | Not Available | - | 1178596 - 1179273 | 25210.2 |
| peptide chain release factor 1 | PLIM_RS04800 | Q7ULT3 | - | 1179810 - 1180901 | 40763.5 |
| type b 50s ribosomal protein l31 | PLIM_RS04805 | B2JG54 | - | 1181135 - 1181392 | 10045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.