Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide kinase inaa family protein | PLIM_RS04700 | Not Available | + | 1152084 - 1152890 | 31281.0 |
| pvc-type heme-binding cxxch protein | PLIM_RS04705 | Not Available | - | 1153250 - 1156669 | 126844.0 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS04710 | B0Y565 | + | 1157184 - 1159277 | 76858.0 |
| membrane protein | PLIM_RS04715 | Not Available | + | 1159367 - 1159813 | 16424.0 |
| fad:protein fmn transferase | PLIM_RS04720 | Not Available | - | 1159801 - 1161021 | 43908.5 |
| formylglycine-generating enzyme family protein | PLIM_RS04725 | Q7AJA5 | + | 1161471 - 1162550 | 40617.8 |
| atp-dependent dna helicase recg | PLIM_RS04730 | Q55681 | - | 1162841 - 1164952 | 79068.4 |
| acetolactate synthase | PLIM_RS04735 | Not Available | + | 1165124 - 1165630 | 18605.2 |
| fasciclin domain-containing protein | PLIM_RS04740 | P74615 | - | 1165852 - 1166304 | 15074.5 |
| hypothetical protein | PLIM_RS04745 | Not Available | - | 1166628 - 1168160 | 55375.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.