Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS04645 | Not Available | + | 1137794 - 1138453 | 23990.8 |
| glucans biosynthesis glucosyltransferase mdoh | PLIM_RS04650 | Q8EF78 | + | 1138764 - 1140815 | 76257.9 |
| porin | PLIM_RS04655 | Not Available | - | 1140844 - 1142295 | 54123.6 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS04660 | Q9Z7F0 | - | 1142698 - 1144431 | 66194.8 |
| citrate synthase | PLIM_RS04670 | Not Available | + | 1145128 - 1146273 | 41713.1 |
| hypothetical protein | PLIM_RS04675 | Not Available | + | 1146382 - 1146801 | 15263.9 |
| phosphotransferase | PLIM_RS04680 | Not Available | + | 1146810 - 1148078 | 47262.4 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | PLIM_RS04685 | Q74BF6 | + | 1148321 - 1149883 | 56352.1 |
| lipopolysaccharide heptosyltransferase ii | PLIM_RS04690 | Not Available | + | 1149880 - 1150944 | 38830.3 |
| glycosyltransferase family 4 protein | PLIM_RS04695 | Q59002 | + | 1150958 - 1152103 | 42923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.