Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | PLIM_RS04595 | Not Available | - | 1125534 - 1126019 | 17933.2 |
| sdr family nad(p)-dependent oxidoreductase | PLIM_RS04600 | Q9LHT0 | + | 1126305 - 1127060 | 25485.0 |
| smi1/knr4 family protein | PLIM_RS04605 | Not Available | - | 1127170 - 1127631 | 17235.7 |
| fused dsp-ptpase phosphatase/nad kinase-like protein | PLIM_RS22430 | Not Available | - | 1127850 - 1128896 | 38423.9 |
| prolyl oligopeptidase family serine peptidase | PLIM_RS04615 | Not Available | - | 1129007 - 1131055 | 76328.0 |
| ankyrin repeat domain-containing protein | PLIM_RS04620 | Not Available | - | 1131479 - 1131964 | 17956.5 |
| rep-associated tyrosine transposase | PLIM_RS04625 | Not Available | - | 1132092 - 1132601 | 20142.3 |
| hypothetical protein | PLIM_RS04630 | Not Available | - | 1132802 - 1133716 | 33659.8 |
| alpha-keto acid decarboxylase family protein | PLIM_RS04635 | Q742Q2 | - | 1133798 - 1135603 | 65982.6 |
| glucan biosynthesis protein g | PLIM_RS04640 | A6VDK1 | + | 1136241 - 1137797 | 58613.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.