Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding and (fe-s)-binding domain-containing protein | PLIM_RS04545 | Q94AX4 | - | 1111547 - 1114609 | 112319.0 |
| metallophosphoesterase | PLIM_RS04555 | Not Available | + | 1115307 - 1116392 | 40307.8 |
| vwa domain-containing protein | PLIM_RS04560 | Not Available | - | 1116550 - 1118469 | 71217.7 |
| alpha/beta hydrolase | PLIM_RS22410 | Not Available | + | 1119299 - 1120171 | 32585.4 |
| hypothetical protein | PLIM_RS04570 | Not Available | - | 1120238 - 1121026 | 28434.3 |
| had family hydrolase | PLIM_RS04575 | Not Available | - | 1121179 - 1121862 | 25120.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PLIM_RS22415 | P29252 | - | 1121946 - 1122713 | 28271.1 |
| flp family type ivb pilin | PLIM_RS23590 | Not Available | - | 1123044 - 1123217 | 6133.39 |
| duf1559 domain-containing protein | PLIM_RS04585 | Not Available | + | 1123696 - 1124856 | 40825.4 |
| hypothetical protein | PLIM_RS22425 | Not Available | + | 1125073 - 1125519 | 16078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.