Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1559 domain-containing protein | PLIM_RS04435 | Not Available | + | 1086936 - 1087961 | 35740.3 |
| anthranilate phosphoribosyltransferase | PLIM_RS04445 | Q2RIT6 | - | 1088593 - 1089672 | 37518.1 |
| hypothetical protein | PLIM_RS04450 | Not Available | - | 1089780 - 1090730 | 33114.4 |
| atp-dependent helicase | PLIM_RS04455 | Not Available | - | 1091049 - 1093586 | 94967.0 |
| hypothetical protein | PLIM_RS04465 | Not Available | + | 1094072 - 1096264 | 78409.5 |
| 30s ribosomal protein s21 | PLIM_RS04470 | Q7UZ14 | - | 1096735 - 1096929 | 7929.77 |
| Trna-leu | Not Available | Not Available | + | 1097456 - 1097539 | Not Available |
| aspartate ammonia-lyase | PLIM_RS04480 | Q9FBN6 | + | 1097933 - 1099357 | 51159.7 |
| exea family protein | PLIM_RS04485 | Not Available | - | 1099461 - 1100318 | 31042.7 |
| hypothetical protein | PLIM_RS04490 | Not Available | - | 1100361 - 1100885 | 18421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.