Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | PLIM_RS04385 | Not Available | - | 1069315 - 1070094 | 28832.9 |
| peptidylprolyl isomerase | PLIM_RS04390 | Not Available | - | 1070167 - 1071231 | 39624.1 |
| degt/dnrj/eryc1/strs aminotransferase family protein | PLIM_RS04395 | P15263 | + | 1072126 - 1073316 | 42976.8 |
| lysine--trna ligase | PLIM_RS04400 | Q2RM49 | + | 1073576 - 1075039 | 55052.5 |
| hypothetical protein | PLIM_RS04405 | Not Available | + | 1075240 - 1077624 | 89048.1 |
| atpase | PLIM_RS04410 | Not Available | + | 1077693 - 1081721 | 149643.0 |
| hypothetical protein | PLIM_RS04415 | Not Available | + | 1081754 - 1082572 | 28615.8 |
| trna pseudouridine(38-40) synthase trua | PLIM_RS04420 | A3DJK8 | - | 1082473 - 1083390 | 33985.2 |
| serine--trna ligase | PLIM_RS04425 | Q7UXX6 | - | 1083768 - 1085057 | 47734.2 |
| dipeptidase | PLIM_RS04430 | Q3ZC84 | - | 1085177 - 1086553 | 50330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.