Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chex | PLIM_RS22390 | Not Available | + | 1048166 - 1048669 | 18136.5 |
| pp2c family protein-serine/threonine phosphatase | PLIM_RS04290 | Not Available | - | 1048685 - 1049953 | 46833.0 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | PLIM_RS04295 | O33341 | - | 1050192 - 1050986 | 29112.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | PLIM_RS04300 | O05515 | + | 1051424 - 1051909 | 17976.6 |
| hypothetical protein | PLIM_RS04305 | Not Available | - | 1051990 - 1052487 | 17731.0 |
| peptide chain release factor-like protein | PLIM_RS22395 | Not Available | - | 1052674 - 1053279 | 22867.3 |
| duf58 domain-containing protein | PLIM_RS04315 | Not Available | + | 1053614 - 1055272 | 60321.7 |
| dinb family protein | PLIM_RS22400 | Not Available | - | 1055340 - 1055831 | 17752.4 |
| voc family protein | PLIM_RS04325 | Not Available | + | 1056162 - 1056752 | 21046.7 |
| serine/threonine-protein kinase | PLIM_RS04330 | Not Available | + | 1056807 - 1058384 | 58919.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.