Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | PLIM_RS04235 | Not Available | + | 1037458 - 1038159 | 26432.0 |
| hypothetical protein | PLIM_RS04240 | Not Available | + | 1038156 - 1038863 | 27087.8 |
| aldo/keto reductase | PLIM_RS04245 | Q8X529 | + | 1038939 - 1039952 | 37318.7 |
| protocatechuate 3,4-dioxygenase | PLIM_RS04250 | Not Available | + | 1040078 - 1040884 | 28767.0 |
| duf6263 family protein | PLIM_RS04255 | Not Available | - | 1040972 - 1042240 | 45154.4 |
| vwa domain-containing protein | PLIM_RS04260 | Not Available | + | 1042519 - 1043511 | 35766.2 |
| carboxymuconolactone decarboxylase family protein | PLIM_RS22385 | Not Available | - | 1043569 - 1044210 | 23325.9 |
| peroxiredoxin | PLIM_RS04270 | A0A0K3AUJ9 | - | 1044393 - 1044935 | 20043.7 |
| hypothetical protein | PLIM_RS24520 | Not Available | - | 1045274 - 1046509 | 43406.5 |
| cytochrome-c peroxidase | PLIM_RS04280 | Q49128 | - | 1046794 - 1047804 | 36636.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.