Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS04175 | Not Available | - | 1026017 - 1026412 | 13909.5 |
| Trna-leu | Not Available | Not Available | + | 1027034 - 1027118 | Not Available |
| nucleoside hydrolase | PLIM_RS04185 | B5R1P1 | - | 1027179 - 1028144 | 35165.6 |
| fxsa family protein | PLIM_RS22380 | Not Available | + | 1028288 - 1028896 | 21928.9 |
| response regulator | PLIM_RS04195 | Not Available | - | 1029106 - 1030326 | 44258.6 |
| type ii and iii secretion system protein family protein | PLIM_RS04200 | P34750 | - | 1030481 - 1032349 | 65658.9 |
| flp pilus assembly protein cpab | PLIM_RS04205 | Not Available | - | 1032564 - 1033730 | 42055.1 |
| prepilin peptidase | PLIM_RS04210 | P45794 | - | 1034143 - 1034694 | 20109.5 |
| flp family type ivb pilin | PLIM_RS04220 | Not Available | - | 1035320 - 1035493 | 5967.39 |
| mfs transporter | PLIM_RS04225 | Not Available | - | 1035964 - 1037262 | 47080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.