Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS04075 | Not Available | - | 999282 - 999971 | 24647.1 |
| tryptophan--trna ligase | PLIM_RS04080 | Q7UQA4 | - | 1000223 - 1001200 | 36011.3 |
| dihydroorotate dehydrogenase | PLIM_RS04085 | A1ASB3 | - | 1001277 - 1002230 | 33324.4 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PLIM_RS04090 | B9K857 | + | 1002496 - 1003704 | 43252.2 |
| xylr family transcriptional regulator | PLIM_RS04095 | Not Available | - | 1003812 - 1004966 | 43414.1 |
| psd1 and planctomycete cytochrome c domain-containing protein | PLIM_RS04100 | Not Available | + | 1005414 - 1008065 | 99075.8 |
| duf1501 domain-containing protein | PLIM_RS04105 | Not Available | + | 1008163 - 1009617 | 52804.8 |
| aryl-sulfate sulfotransferase | PLIM_RS04110 | Not Available | + | 1009783 - 1010700 | 34022.5 |
| sugar-binding protein | PLIM_RS04115 | P39265 | + | 1010828 - 1011928 | 40215.1 |
| sugar abc transporter atp-binding protein | PLIM_RS04120 | Q1AXG5 | + | 1012005 - 1013570 | 56606.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.