Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wd40 repeat domain-containing protein | PLIM_RS04020 | Not Available | - | 985134 - 986246 | 39058.2 |
| anthranilate synthase component i | PLIM_RS04025 | P14953 | - | 986819 - 988438 | 59036.4 |
| uvrb/uvrc motif-containing protein | PLIM_RS04035 | P37569 | + | 989207 - 989728 | 19572.8 |
| protein arginine kinase | PLIM_RS04040 | B8D093 | + | 989842 - 990912 | 40148.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | PLIM_RS04045 | Q7UM15 | - | 990971 - 991735 | 28342.3 |
| hypothetical protein | PLIM_RS04050 | Not Available | + | 991941 - 992522 | 20277.2 |
| hypothetical protein | PLIM_RS04055 | Not Available | - | 992575 - 994719 | 80012.1 |
| formylmethanofuran--tetrahydromethanopterin n-formyltransferase | PLIM_RS04060 | Q1H0Q5 | - | 994773 - 995804 | 36514.7 |
| abc transporter atp-binding protein | PLIM_RS04065 | P46903 | + | 996168 - 996935 | 28008.0 |
| abc transporter permease subunit/cpbp intramembrane protease | PLIM_RS04070 | Not Available | + | 997003 - 999300 | 82856.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.