Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PLIM_RS03925 | Not Available | + | 961125 - 961958 | 31597.2 |
| abc transporter atp-binding protein | PLIM_RS03930 | O31708 | - | 962000 - 963847 | 68895.3 |
| abc transporter atp-binding protein | PLIM_RS03935 | P71082 | - | 963844 - 965796 | 71579.8 |
| ybay family lipoprotein | PLIM_RS22370 | Not Available | + | 966156 - 967022 | 32372.9 |
| secreted protein | PLIM_RS03945 | Not Available | - | 967154 - 968590 | 52893.8 |
| duf1559 domain-containing protein | PLIM_RS03950 | Not Available | - | 968597 - 969598 | 36273.3 |
| mota/tolq/exbb proton channel family protein | PLIM_RS03955 | P72941 | + | 969857 - 970876 | 36164.2 |
| fur family transcriptional regulator | PLIM_RS03960 | Not Available | + | 971004 - 971462 | 16759.0 |
| gtp cyclohydrolase i fole | PLIM_RS03965 | Q7UJJ7 | + | 971964 - 972542 | 21562.5 |
| hypothetical protein | PLIM_RS24515 | Not Available | - | 972765 - 972911 | 5052.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.