Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | PLIM_RS03825 | Not Available | + | 939461 - 940405 | 34700.4 |
| ornithine cyclodeaminase family protein | PLIM_RS03830 | Q81HB0 | - | 940459 - 941415 | 34122.7 |
| xylulokinase | PLIM_RS03835 | P39211 | - | 941479 - 943014 | 55238.7 |
| hypothetical protein | PLIM_RS03845 | Not Available | + | 943553 - 943735 | 6845.13 |
| minf_1886 family protein | PLIM_RS03850 | Not Available | + | 943941 - 944336 | 15009.9 |
| hypothetical protein | PLIM_RS03855 | Not Available | + | 944448 - 944972 | 19172.2 |
| dna repair protein reco | PLIM_RS03860 | Q7USC2 | + | 945103 - 945852 | 27793.7 |
| tetratricopeptide repeat protein | PLIM_RS03865 | Not Available | + | 945944 - 947434 | 55283.2 |
| lps assembly lipoprotein lpte | PLIM_RS03870 | Not Available | + | 947431 - 948024 | 22178.3 |
| hypothetical protein | PLIM_RS24020 | Not Available | + | 948300 - 948965 | 25257.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.