Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS03715 | Not Available | + | 918893 - 919294 | 14383.2 |
| rna polymerase sigma factor | PLIM_RS03720 | Not Available | + | 919782 - 920336 | 20993.7 |
| sigma-54 dependent transcriptional regulator | PLIM_RS03725 | Not Available | - | 920574 - 921923 | 50121.8 |
| aldose 1-epimerase | PLIM_RS03730 | Not Available | - | 922008 - 922964 | 35271.9 |
| hypothetical protein | PLIM_RS03740 | Not Available | + | 923243 - 924334 | 40634.1 |
| hypothetical protein | PLIM_RS03745 | Not Available | - | 924351 - 924659 | 11343.0 |
| sulfatase | PLIM_RS03750 | Not Available | - | 924719 - 926449 | 63453.5 |
| marr family winged helix-turn-helix transcriptional regulator | PLIM_RS03755 | Not Available | + | 926763 - 927218 | 17015.7 |
| esterase family protein | PLIM_RS03760 | P10478 | + | 927251 - 928108 | 31790.9 |
| hypothetical protein | PLIM_RS03765 | Not Available | - | 928622 - 929158 | 18372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.