Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| linear amide c-n hydrolase | PLIM_RS03665 | P54948 | - | 907292 - 908497 | 43671.8 |
| radical sam family heme chaperone hemw | PLIM_RS03670 | Q9CGF7 | - | 908717 - 909850 | 42721.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 910023 - 910119 | Not Available |
| dna polymerase iii subunit gamma/tau | PLIM_RS23575 | P09122 | + | 910383 - 912431 | 74444.6 |
| ybab/ebfc family nucleoid-associated protein | PLIM_RS03685 | Not Available | + | 912506 - 912847 | 12102.7 |
| recombination mediator recr | PLIM_RS03690 | Q7UQ68 | + | 912941 - 913564 | 22433.2 |
| rna polymerase factor sigma-54 | PLIM_RS03695 | P06223 | + | 913954 - 915441 | 56904.0 |
| hypothetical protein | PLIM_RS03700 | Not Available | - | 915714 - 916040 | 11579.1 |
| duf1559 domain-containing protein | PLIM_RS03705 | Not Available | - | 916167 - 917216 | 37115.8 |
| hypothetical protein | PLIM_RS03710 | Not Available | - | 917542 - 918282 | 25296.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.